This will be my first trip to Japan and I'm very much in need of advice regarding transportation!
Because I am traveling between many cities in a short amount of time, my friend recommended I purchase a JR Pass, which I plan on doing. However, I will also be traveling within the city and I am not sure where to look for information regarding train stations, buses and so on. Is there somewhere I can find a list of JR stations or buses, e.g., like the MTS map San Diego has or the BART stations in San Francisco?
Broad itinerary (as of now):
Osaka! - I need to get from Kansai International Airport to our hotel near Shinsaibashi Station
Osaka to Kyoto
Kyoto to Nagoya - is there a direct route from Kyoto to Mie?
Nagoya to Tokyo
Because I am staying in Tokyo for a longer period of time, my friend said I should get an IC card. Should I also get IC cards for the other cities? (I am visiting each city for ~1-2 days.) When I was looking for information on IC cards, it looks as though there are different IC cards for each place I am going.
Any help given is greatly appreciated, even a finger in the right direction. Thank you!