11 days in Japan

Hi! I am travelling to Japan 11 days and my itinarary is:
day 1 Narita Airport- Kanazawa
day 2 Kanazawa-Kyoto
day 3 Kyoto
day 4 Kyoto
day 5 Osaka (day trip)
day 6 Nara (day trip)
day 7 Kyoto-Tokyo
day 8 Tokyo
day 9 Hakone (day trip)
day 10 Tokyo
day 11 Tokyo-Narita Airport

I was wondering based on my itinerary as holder of a 7 days JR pass if I cover all of the travel itinerary points for the first 7 days and if you can suggest what kind of train I can take to reach every destinations.

Thank you very much!