What's the best route?

Hi,
I will be in Japan July 27th (via Narita) for 8 days and will be getting the 7 day JRPass.

From there I would like to visit (ideally in this order):
July 27 - The Fuji Subaru Line 5th Station
July 29 - Kyoto
Osaka (From what I'm told a day trip is sufficient)
Aug 1- Tokyo

I want to leave Tokyo for last leg of my trip so I can be close to Narita airport to fly home.

I know Osaka and Kyoto aren't a problem using the JRPass but seems I cannot use the JRPass to get in and out of Fuji Subaru Line 5th Station.
I want to stay here to be close to experience Mt. Fuji but thinking of maybe staying further out at either Hakone or KAWAGUCHIKO but again, I do not think I can access either places via the JRPass.
And I picked these places so I can see Mt.Fuji and hike on some of their trails but I also don't want to waste too much time transferring between stations and/or bus terminals.

Hoping someone (Daniel San, as he seems to be most active in this forum) can offer me a good way/route to see these places.

Thanks in advance.

Ryan